CDS

Accession Number TCMCG017C30876
gbkey CDS
Protein Id OMO61039.1
Location complement(join(280..450,755..855,1571..1629,1731..1846,3277..3459,3720..3801,4994..5085,6419..6562,7724..7804,9064..9147,9848..9949,10418..10513,10591..10738,10840..10922,11041..11067))
GeneID InterPro:IPR007258
Organism Corchorus olitorius
locus_tag COLO4_33595

Protein

Length 522aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01021777.1
Definition Vps52/Sac2 [Corchorus olitorius]
Locus_tag COLO4_33595

EGGNOG-MAPPER Annotation

COG_category UZ
Description Vacuolar protein sorting-associated protein 52
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko04131        [VIEW IN KEGG]
KEGG_ko ko:K20298        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000139        [VIEW IN EMBL-EBI]
GO:0000149        [VIEW IN EMBL-EBI]
GO:0000902        [VIEW IN EMBL-EBI]
GO:0000904        [VIEW IN EMBL-EBI]
GO:0000938        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005768        [VIEW IN EMBL-EBI]
GO:0005794        [VIEW IN EMBL-EBI]
GO:0005802        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006892        [VIEW IN EMBL-EBI]
GO:0006896        [VIEW IN EMBL-EBI]
GO:0007034        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009653        [VIEW IN EMBL-EBI]
GO:0009826        [VIEW IN EMBL-EBI]
GO:0009856        [VIEW IN EMBL-EBI]
GO:0009860        [VIEW IN EMBL-EBI]
GO:0009932        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010008        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016049        [VIEW IN EMBL-EBI]
GO:0016192        [VIEW IN EMBL-EBI]
GO:0016197        [VIEW IN EMBL-EBI]
GO:0016482        [VIEW IN EMBL-EBI]
GO:0017016        [VIEW IN EMBL-EBI]
GO:0017137        [VIEW IN EMBL-EBI]
GO:0019899        [VIEW IN EMBL-EBI]
GO:0019905        [VIEW IN EMBL-EBI]
GO:0019953        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0030154        [VIEW IN EMBL-EBI]
GO:0031090        [VIEW IN EMBL-EBI]
GO:0031267        [VIEW IN EMBL-EBI]
GO:0031410        [VIEW IN EMBL-EBI]
GO:0031982        [VIEW IN EMBL-EBI]
GO:0031984        [VIEW IN EMBL-EBI]
GO:0032456        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032588        [VIEW IN EMBL-EBI]
GO:0032989        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0040007        [VIEW IN EMBL-EBI]
GO:0042147        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044431        [VIEW IN EMBL-EBI]
GO:0044433        [VIEW IN EMBL-EBI]
GO:0044440        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044703        [VIEW IN EMBL-EBI]
GO:0044706        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0048193        [VIEW IN EMBL-EBI]
GO:0048468        [VIEW IN EMBL-EBI]
GO:0048588        [VIEW IN EMBL-EBI]
GO:0048589        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0048868        [VIEW IN EMBL-EBI]
GO:0048869        [VIEW IN EMBL-EBI]
GO:0051020        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0051704        [VIEW IN EMBL-EBI]
GO:0060560        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0097708        [VIEW IN EMBL-EBI]
GO:0098588        [VIEW IN EMBL-EBI]
GO:0098791        [VIEW IN EMBL-EBI]
GO:0098805        [VIEW IN EMBL-EBI]
GO:0099023        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCCGATGTTGCAGCAAACAATGTGTCTCACCAAACTGACACCCCCAAAAATGTTTTTGATTTTGGAGCATTTGTTGGAGACTTGATTGTTGAGGACGATGCCAGCAGCGATGATATATCGTTGGAGGGGCTTCAACAAGAATTGGAGGAATGCAAAAATGATGATGTAAGTAATTTTCCTTTTGTTCTCCTTTGGACTACTGCTGTAGGCTTTCCTTTGAGGCTTTATATCATACCTGCAACAAGTGAAAACATGGTGGTTGCAAACATATTGTCAAAAGGTATAAAACTAAGGGAGCACACAAAGGGGGTTGAGAACAAATTACGACAGGTTGAGTTGGATTCAATTCAGGATTATATAAAAGAAAGTGATAACCTAGTGTCTCTCCATGATCAAATTCGTGACTGTGATAGCATCTTGTCACAAATGGAGACCCTTCTCAGCGGATTTCAGGCTGAGATTGGTTCTATAAGTTCAGACATAAAAATACTCCAAGAAAAGTCTATGGATATGGGTCTAAAGCTAAAGAATCGCAAGGTGGCAGAATCAAAGCTGGCTAAATTTGTTGAAGACATTATAGTTCCTCCAAGGATGGTTGACATAATTGTTGATGGGGAGGTCAATGATGAATATATGAGAACTCTTGACATTCTAAGCAAGAAGCTTAAGTTTGTGGAAGTGGACCCAATGGTTAATGCTTCAAAAGCACTGAAAGATGTTCAGCCTGAGCTTGAAAAGTTGAGGCAGAAAGCAGTATCAAAGGTGTTTGATTTTATTGTTCAAAAGCTTCAAGCATTGAGGAAACCAAAGACAAACATCCAGATCCTTCAACAAAATGTCCTTTTAAAATATAAGTATGTTATCTGCTTCCTCAAAGAACATAGCAAGGAGGTTTACAGTGAAGTTCGTGCAGCTTATATTGACACAATGAATAAGGTTCTAAGTGCACAATTCCGAGCTTACATTCAAGCACTGGAGAAATTGCAGTTAGATATTGCAACATCTAATGATTTGATTGGTGTGGAGACCAGAAGCACTAGTCTTTTTTCAAGAGGGAGAGAACCACTGAAAAACCGTTCTGCTGTTTTTGCATTGGGAGAGAGATTAAACGTCTTAAAGGAAATTGATCAACCAGCACTTATTCCACATATTGCTGAAGCTAGCTCTTTAAAGTATCCTTATGAGGTCCTCTTCAGGAGTTTGCACAAACTGCTTATGGATACAGCAACTTCTGAGTATCTGTTTTGTGATGAGTTCTTAGGAGAGGAGTCCATATTTTATGAAATTTTTGCTGGTCCATTTGCTGTTATTGATGAACATTTCAATTCTATTCTTCCAAATTGTTATGATGCTATTGGCCTAATGCTTATGATACGCATTATACACCAGCACCAGTACAAATGGTTTCTTGTGCAAGCGATGTTTTTGCCTGATAGCAATGCCAAAATGTGGGAAGTTTTATGTTCTTTTCATTTGTTGTCTGACCTAGGGTCACCATATGCCTACCATGCAGTGTTTCTTTCTATTGTTCAATGTTTCATGCTGCATGATTGCAAATTTGATTAG
Protein:  
MADVAANNVSHQTDTPKNVFDFGAFVGDLIVEDDASSDDISLEGLQQELEECKNDDVSNFPFVLLWTTAVGFPLRLYIIPATSENMVVANILSKGIKLREHTKGVENKLRQVELDSIQDYIKESDNLVSLHDQIRDCDSILSQMETLLSGFQAEIGSISSDIKILQEKSMDMGLKLKNRKVAESKLAKFVEDIIVPPRMVDIIVDGEVNDEYMRTLDILSKKLKFVEVDPMVNASKALKDVQPELEKLRQKAVSKVFDFIVQKLQALRKPKTNIQILQQNVLLKYKYVICFLKEHSKEVYSEVRAAYIDTMNKVLSAQFRAYIQALEKLQLDIATSNDLIGVETRSTSLFSRGREPLKNRSAVFALGERLNVLKEIDQPALIPHIAEASSLKYPYEVLFRSLHKLLMDTATSEYLFCDEFLGEESIFYEIFAGPFAVIDEHFNSILPNCYDAIGLMLMIRIIHQHQYKWFLVQAMFLPDSNAKMWEVLCSFHLLSDLGSPYAYHAVFLSIVQCFMLHDCKFD